PLMD::ERMSD Member List

This is the complete list of members for PLMD::ERMSD, including all inherited members.

calcMat(const std::vector< Vector > &positions, const Pbc &pbc, std::vector< Vector4d > &mat, std::vector< TensorGeneric< 4, 3 > > &Gderivatives)	PLMD::ERMSD
calculate(const std::vector< Vector > &positions, const Pbc &pbc, std::vector< Vector > &derivatives, Tensor &virial)	PLMD::ERMSD
clear()	PLMD::ERMSD
cutoff	PLMD::ERMSD	private
ERMSD()	PLMD::ERMSD	inline
inPair(unsigned i, unsigned j)	PLMD::ERMSD
natoms	PLMD::ERMSD	private
nresidues	PLMD::ERMSD	private
pairs	PLMD::ERMSD	private
reference_mat	PLMD::ERMSD	private
setReference(const std::vector< Vector > &reference, const std::vector< unsigned > &pairs_vec, double mycutoff=0.24)	PLMD::ERMSD