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MueLu_PreserveDirichletAggregationAlgorithm_kokkos_def.hpp
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// @HEADER
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//
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// ***********************************************************************
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//
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// MueLu: A package for multigrid based preconditioning
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// Copyright 2012 Sandia Corporation
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//
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// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
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// the U.S. Government retains certain rights in this software.
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//
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// Redistribution and use in source and binary forms, with or without
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// modification, are permitted provided that the following conditions are
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// met:
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//
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// 1. Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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//
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// 2. Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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//
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// 3. Neither the name of the Corporation nor the names of the
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// contributors may be used to endorse or promote products derived from
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// this software without specific prior written permission.
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//
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// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
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// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
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// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
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// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
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// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
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// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// Questions? Contact
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// Jonathan Hu (jhu@sandia.gov)
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// Andrey Prokopenko (aprokop@sandia.gov)
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// Ray Tuminaro (rstumin@sandia.gov)
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//
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// ***********************************************************************
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//
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// @HEADER
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#ifndef MUELU_PRESERVEDIRICHLETAGGREGATIONALGORITHM_KOKKOS_DEF_HPP
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#define MUELU_PRESERVEDIRICHLETAGGREGATIONALGORITHM_KOKKOS_DEF_HPP
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#include <Teuchos_Comm.hpp>
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#include <Teuchos_CommHelpers.hpp>
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#include <Xpetra_Vector.hpp>
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#include "
MueLu_PreserveDirichletAggregationAlgorithm_kokkos_decl.hpp
"
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#include "MueLu_LWGraph_kokkos.hpp"
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#include "MueLu_Aggregates.hpp"
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#include "
MueLu_Exceptions.hpp
"
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#include "
MueLu_Monitor.hpp
"
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namespace
MueLu
{
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template
<
class
LocalOrdinal,
class
GlobalOrdinal,
class
Node>
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void
PreserveDirichletAggregationAlgorithm_kokkos<LocalOrdinal, GlobalOrdinal, Node>::
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BuildAggregates
(Teuchos::ParameterList
const
& params,
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LWGraph_kokkos
const
& graph,
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Aggregates
& aggregates,
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Kokkos::View<unsigned*, typename LWGraph_kokkos::device_type>& aggStat,
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LO& numNonAggregatedNodes)
const
{
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Monitor
m(*
this
,
"BuildAggregates"
);
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using
local_ordinal_type =
typename
LWGraph_kokkos::local_ordinal_type;
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// Extract parameters and data from:
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// 1) the parameter list
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const
bool
preserve = params.get<
bool
>(
"aggregation: preserve Dirichlet points"
);
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// 2) the amalgamated graph
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const
LO numNodes = graph.GetNodeNumVertices();
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const
int
myRank = graph.GetComm()->getRank();
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// 3) the aggregates
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auto
vertex2AggId = aggregates.GetVertex2AggId()->getDeviceLocalView(Xpetra::Access::ReadWrite);
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auto
procWinner = aggregates.GetProcWinner() ->getDeviceLocalView(Xpetra::Access::ReadWrite);
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// A view is needed to count on the fly the current number of local aggregates
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Kokkos::View<LO, device_type> aggCount(
"aggCount"
);
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if
(preserve) {
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Kokkos::deep_copy(aggCount, aggregates.GetNumAggregates());
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}
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Kokkos::parallel_for(
"MueLu - PreserveDirichlet: tagging ignored nodes"
,
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Kokkos::RangePolicy<local_ordinal_type, execution_space>(0, numNodes),
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KOKKOS_LAMBDA(
const
local_ordinal_type nodeIdx) {
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if
(aggStat(nodeIdx) ==
BOUNDARY
) {
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aggStat(nodeIdx) =
IGNORED
;
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const
LO aggIdx = Kokkos::atomic_fetch_add(&aggCount(), 1);
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if
(preserve) {
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// aggregates.SetIsRoot(nodeIdx);
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vertex2AggId(nodeIdx, 0) = aggIdx;
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procWinner(nodeIdx, 0) = myRank;
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}
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}
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});
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typename
Kokkos::View<LO, device_type>::HostMirror aggCount_h
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= Kokkos::create_mirror_view(aggCount);
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Kokkos::deep_copy(aggCount_h, aggCount);
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// In this phase the number of new aggregates is the same
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// as the number of newly aggregated nodes.
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numNonAggregatedNodes -= (aggCount_h() - aggregates.GetNumAggregates());
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// update aggregate object
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if
(preserve) {
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aggregates.SetNumAggregates(aggCount_h());
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}
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}
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}
// end namespace
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#endif
// MUELU_PRESERVEDIRICHLETAGGREGATIONALGORITHM_KOKKOS_DEF_HPP
MueLu_Exceptions.hpp
MueLu_Monitor.hpp
MueLu_PreserveDirichletAggregationAlgorithm_kokkos_decl.hpp
MueLu::Aggregates
Container class for aggregation information.
Definition
MueLu_Aggregates_decl.hpp:106
MueLu::LWGraph_kokkos
Lightweight MueLu representation of a compressed row storage graph.
Definition
MueLu_LWGraph_kokkos_decl.hpp:73
MueLu::Monitor
Timer to be used in non-factories.
Definition
MueLu_Monitor.hpp:107
MueLu::PreserveDirichletAggregationAlgorithm_kokkos::BuildAggregates
void BuildAggregates(const Teuchos::ParameterList ¶ms, const LWGraph_kokkos &graph, Aggregates &aggregates, Kokkos::View< unsigned *, device_type > &aggStat, LO &numNonAggregatedNodes) const
Local aggregation.
Definition
MueLu_PreserveDirichletAggregationAlgorithm_kokkos_def.hpp:65
MueLu
Namespace for MueLu classes and methods.
Definition
MueLu_BrickAggregationFactory_decl.hpp:78
MueLu::BOUNDARY
@ BOUNDARY
Definition
MueLu_Types.hpp:82
MueLu::IGNORED
@ IGNORED
Definition
MueLu_Types.hpp:79
src
Graph
UncoupledAggregation
MueLu_PreserveDirichletAggregationAlgorithm_kokkos_def.hpp
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