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MueLu_InterfaceAggregationAlgorithm_def.hpp
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// @HEADER
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//
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// ***********************************************************************
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//
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// MueLu: A package for multigrid based preconditioning
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// Copyright 2012 Sandia Corporation
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//
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// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
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// the U.S. Government retains certain rights in this software.
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// Redistribution and use in source and binary forms, with or without
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// modification, are permitted provided that the following conditions are
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// met:
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// 1. Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// 2. Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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//
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// 3. Neither the name of the Corporation nor the names of the
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// contributors may be used to endorse or promote products derived from
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// this software without specific prior written permission.
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// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
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// Jonathan Hu (jhu@sandia.gov)
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// Andrey Prokopenko (aprokop@sandia.gov)
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// Ray Tuminaro (rstumin@sandia.gov)
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//
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// ***********************************************************************
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//
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// @HEADER
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/*
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* MueLu_OnePtAggregationAlgorithm_def.hpp
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*
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* Created on: Sep 18, 2012
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* Author: Tobias Wiesner
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*/
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#ifndef MUELU_INTERFACEAGGREGATIONALGORITHM_DEF_HPP_
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#define MUELU_INTERFACEAGGREGATIONALGORITHM_DEF_HPP_
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#include <Teuchos_Comm.hpp>
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#include <Teuchos_CommHelpers.hpp>
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#include <Xpetra_Vector.hpp>
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#include "
MueLu_InterfaceAggregationAlgorithm_decl.hpp
"
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//#include "MueLu_Graph.hpp"
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#include "
MueLu_GraphBase.hpp
"
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#include "MueLu_Aggregates.hpp"
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#include "
MueLu_Exceptions.hpp
"
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#include "
MueLu_Monitor.hpp
"
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namespace
MueLu
{
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template
<
class
LocalOrdinal,
class
GlobalOrdinal,
class
Node>
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InterfaceAggregationAlgorithm<LocalOrdinal, GlobalOrdinal, Node>::InterfaceAggregationAlgorithm
(RCP<const FactoryBase>
const
&
/* graphFact */
)
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{
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}
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template
<
class
LocalOrdinal,
class
GlobalOrdinal,
class
Node>
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void
InterfaceAggregationAlgorithm<LocalOrdinal, GlobalOrdinal, Node>::BuildAggregates
(Teuchos::ParameterList
const
&
/* params */
,
GraphBase
const
& graph,
Aggregates
& aggregates, std::vector<unsigned>& aggStat, LO& numNonAggregatedNodes)
const
{
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Monitor
m(*
this
,
"BuildAggregates"
);
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const
LocalOrdinal
nRows = graph.
GetNodeNumVertices
();
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const
int
myRank = graph.
GetComm
()->getRank();
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// vertex ids for output
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Teuchos::ArrayRCP<LocalOrdinal> vertex2AggId = aggregates.GetVertex2AggId()->getDataNonConst(0);
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Teuchos::ArrayRCP<LocalOrdinal> procWinner = aggregates.GetProcWinner()->getDataNonConst(0);
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// some internal variables
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LocalOrdinal
numLocalAggregates = aggregates.GetNumAggregates();
// number of local aggregates on current proc
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// main loop over all local rows of graph(A)
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for
(
int
iNode1 = 0; iNode1 < nRows; ++iNode1) {
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if
(aggStat[iNode1] ==
INTERFACE
) {
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aggregates.SetIsRoot(iNode1);
// mark iNode1 as root node for new aggregate 'agg'
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int
aggIndex = numLocalAggregates;
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std::vector<int> aggList;
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aggList.push_back(iNode1);
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ArrayView<const LO> neighOfINode = graph.
getNeighborVertices
(iNode1);
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for
(
int
j = 0; j < neighOfINode.size(); ++j) {
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LO neigh = neighOfINode[j];
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if
(neigh != iNode1 && graph.
isLocalNeighborVertex
(neigh)) {
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if
(aggStat[neigh] !=
AGGREGATED
&& aggStat[neigh] !=
INTERFACE
&&
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aggStat[neigh] !=
IGNORED
) {
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aggList.push_back(neigh);
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}
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}
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}
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for
(
size_t
k = 0; k < aggList.size(); k++) {
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aggStat[aggList[k]] =
AGGREGATED
;
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vertex2AggId[aggList[k]] = aggIndex;
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procWinner[aggList[k]] = myRank;
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}
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++numLocalAggregates;
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numNonAggregatedNodes -= aggList.size();
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}
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}
// end for
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// update aggregate object
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aggregates.SetNumAggregates(numLocalAggregates);
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}
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}
// end namespace
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#endif
/* MUELU_INTERFACEAGGREGATIONALGORITHM_DEF_HPP_ */
MueLu_Exceptions.hpp
MueLu_GraphBase.hpp
MueLu_InterfaceAggregationAlgorithm_decl.hpp
MueLu_Monitor.hpp
LocalOrdinal
MueLu::DefaultLocalOrdinal LocalOrdinal
Definition
MueLu_UseDefaultTypes.hpp:50
MueLu::Aggregates
Container class for aggregation information.
Definition
MueLu_Aggregates_decl.hpp:106
MueLu::GraphBase
MueLu representation of a graph.
Definition
MueLu_GraphBase.hpp:68
MueLu::GraphBase::GetComm
virtual const RCP< const Teuchos::Comm< int > > GetComm() const =0
MueLu::GraphBase::isLocalNeighborVertex
virtual bool isLocalNeighborVertex(LocalOrdinal v) const =0
Return true if vertex with local id 'v' is on current process.
MueLu::GraphBase::getNeighborVertices
virtual Teuchos::ArrayView< const LocalOrdinal > getNeighborVertices(LocalOrdinal v) const =0
Return the list of vertices adjacent to the vertex 'v'.
MueLu::GraphBase::GetNodeNumVertices
virtual size_t GetNodeNumVertices() const =0
Return number of vertices owned by the calling node.
MueLu::InterfaceAggregationAlgorithm::BuildAggregates
void BuildAggregates(Teuchos::ParameterList const ¶ms, GraphBase const &graph, Aggregates &aggregates, std::vector< unsigned > &aggStat, LO &numNonAggregatedNodes) const
Local aggregation.
Definition
MueLu_InterfaceAggregationAlgorithm_def.hpp:77
MueLu::InterfaceAggregationAlgorithm::InterfaceAggregationAlgorithm
InterfaceAggregationAlgorithm(RCP< const FactoryBase > const &graphFact=Teuchos::null)
Constructor.
Definition
MueLu_InterfaceAggregationAlgorithm_def.hpp:72
MueLu::Monitor
Timer to be used in non-factories.
Definition
MueLu_Monitor.hpp:107
MueLu
Namespace for MueLu classes and methods.
Definition
MueLu_BrickAggregationFactory_decl.hpp:78
MueLu::INTERFACE
@ INTERFACE
Definition
MueLu_Types.hpp:85
MueLu::IGNORED
@ IGNORED
Definition
MueLu_Types.hpp:79
MueLu::AGGREGATED
@ AGGREGATED
Definition
MueLu_Types.hpp:73
src
Graph
UncoupledAggregation
MueLu_InterfaceAggregationAlgorithm_def.hpp
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