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src
euclid
SubdomainGraph_dh.h
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/*@HEADER
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// ***********************************************************************
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//
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// Ifpack: Object-Oriented Algebraic Preconditioner Package
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// Copyright (2002) Sandia Corporation
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//
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// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
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// license for use of this work by or on behalf of the U.S. Government.
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//
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// Redistribution and use in source and binary forms, with or without
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// modification, are permitted provided that the following conditions are
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// met:
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//
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// 1. Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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//
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// 2. Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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//
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// 3. Neither the name of the Corporation nor the names of the
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// contributors may be used to endorse or promote products derived from
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// this software without specific prior written permission.
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//
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// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
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// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
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// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
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// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
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// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
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// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
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// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
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// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
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//
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// ***********************************************************************
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//@HEADER
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*/
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#ifndef SUBDOMAIN_GRAPH_DH
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#define SUBDOMAIN_GRAPH_DH
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#include "euclid_common.h"
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#ifdef __cplusplus
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extern
"C"
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{
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#endif
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#define MAX_SUBDOMAIN_COLOR 100
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/* could be done better: if we can't color the subdomain graph
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with this many colors, an error is thrown in SubdomainGraph_dhColor().
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*/
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/* for internal timing */
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#define TIMING_BINS_SG 10
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enum
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{ TOTAL_SGT,
/* total Init (setup) time */
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FIND_NABORS_SGT,
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ORDER_BDRY_SGT,
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FORM_GRAPH_SGT,
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EXCHANGE_PERMS_SGT
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};
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struct
_subdomain_dh
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{
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int
blocks;
/* number of subdomains */
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int
*ptrs, *adj;
/* csr structure for representing subdomain graph */
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int
*o2n_sub;
/* subdomain graph permutation; */
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int
*n2o_sub;
/* inverse permutation; */
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int
colors;
/* number of colors used for coloring the subdomain graph */
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bool
doNotColor;
/* if true, subdomain graph is not colored and reordered */
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int
*colorVec;
/* if colorVec[i] = x, then subdomain i was colored "x".
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this array is probably only useful for debugging.
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*/
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int
*beg_row;
/* global ordering of first local row owned by P_i */
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int
*beg_rowP;
/* global ordering of first local row owned by P_i after
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subdomain reordering
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*/
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int
*row_count;
/* P_i owns row_count[i] local rows */
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int
*bdry_count;
/* bdry_count[i] of P_i's rows are boundary rows */
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/* Nearest neighbors in subdomain graph, before reordering;
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"self" is not included. Not used for sequential case.
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*/
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int
*loNabors, loCount;
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int
*hiNabors, hiCount;
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int
*allNabors, allCount;
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/* permutation information for global unknowns (matrix rows) */
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int
m;
/* length of n2o_row and o2n_col */
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int
*n2o_row;
/* permutation for locally owned matrix rows */
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int
*o2n_col;
/* permutation for locally owned matrix columns */
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Hash_i_dh o2n_ext;
/* permutation for external columns */
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Hash_i_dh n2o_ext;
/* inverse permutation for external columns */
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double
timing[TIMING_BINS_SG];
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bool
debug;
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};
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extern
void
SubdomainGraph_dhCreate (SubdomainGraph_dh * s);
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extern
void
SubdomainGraph_dhDestroy (SubdomainGraph_dh s);
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extern
void
SubdomainGraph_dhInit (SubdomainGraph_dh s,
int
blocks,
bool
bj,
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void
*A);
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/* Partitions matrix A into the specified number of blocks,
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if there is a single MPI task; for mpi use, "blocks" must be the same
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as the number of mpi tasks; for sequential, it may vary.
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On completion, the subdomain graph will be fully formed,
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(all fields valid); o2n_row[] and n2o_col[] will be permutations
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for the locally owned portion of A such that A's interior nodes are
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ordered first.
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This function may call a partitioner, such as METIS (currently, only for sequential).
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On completion, "o2n" contains a natural ordering, beg_row is identical to
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beg_rowP, and_rowP is identical to end_rowP.
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if "bj" is true, the following setup steps are NOT performed:
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form subdomain graph; find neighbors; order boundary nodes
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*/
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extern
void
SubdomainGraph_dhColor (SubdomainGraph_dh s);
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/*
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Colors and orders subdomain graph; on completion, o2n[], beg_rowP[], and
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end_rowP[] may be altered.
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*/
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extern
int
SubdomainGraph_dhFindOwner (SubdomainGraph_dh s,
int
idx,
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bool
permuted);
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/* Returns the subdomain block to which row idx belongs, or throws an error.
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If "permuted" is true, it's assumed the graph has been permuted (i.e.,
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'globally reordering phase' in PILU algorithm).
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*/
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extern
void
SubdomainGraph_dhExchangePerms (SubdomainGraph_dh s);
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/*
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exchange permutation information for external columns with nearest neighbors;
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caller must ensure SubdomainGraph_dhInit() has completed before calling.
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*/
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extern
void
SubdomainGraph_dhPrintSubdomainGraph (SubdomainGraph_dh s,
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FILE * fp);
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extern
void
SubdomainGraph_dhPrintStatsLong (SubdomainGraph_dh s,
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FILE * fp);
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/* similar to Short, but prints complete list of interior/bdry node ratios;
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also prints subdomain permutation
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*/
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extern
void
SubdomainGraph_dhDump (SubdomainGraph_dh s,
char
*filename);
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/* for testing */
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extern
void
SubdomainGraph_dhPrintRatios (SubdomainGraph_dh s, FILE * fp);
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/* prints ratios of interior/boundary node for all subdomains */
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extern
void
SubdomainGraph_dhPrintStats (SubdomainGraph_dh sg, FILE * fp);
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#ifdef __cplusplus
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}
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#endif
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#endif
_subdomain_dh
Definition
SubdomainGraph_dh.h:69
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