Here is a list of all files with brief descriptions:

browser
doc
example
inout
HDF5_IO.cpp
HDF5_MATLAB.cpp
HDF5Converter.cpp
MatrixMarket_IO.cpp
XML_IO.cpp
MapColoring
cxx_main.cpp
matlab
cxx_main.cpp
model_evaluator
2dsim
EpetraModelEval2DSim.cpp
EpetraModelEval2DSim.hpp
4dopt
EpetraModelEval4DOpt.cpp
EpetraModelEval4DOpt.hpp
EpetraMultiPointModelEval4DOpt.cpp
EpetraMultiPointModelEval4DOpt.hpp
DiagonalQuadraticResponseOnlyOpt
EpetraExt_DiagonalQuadraticResponseOnlyModelEvaluator.cpp
EpetraExt_DiagonalQuadraticResponseOnlyModelEvaluator.hpp
DiagonalTransient
EpetraExt_DiagonalTransientModel.cpp
EpetraExt_DiagonalTransientModel.hpp
GLpApp
GenSQP_DataPool.hpp
GenSQP_Vector.hpp
GenSQP_YUEpetraVector.cpp
GenSQP_YUEpetraVector.hpp
GLpApp_AdvDiffReactOptModel.cpp
GLpApp_AdvDiffReactOptModel.hpp
GLpApp_AdvDiffReactOptModelCreator.cpp
GLpApp_AdvDiffReactOptModelCreator.hpp
GLpApp_GLpYUEpetraDataPool.cpp
GLpApp_GLpYUEpetraDataPool.hpp
rect2DMeshGenerator.cpp
rect2DMeshGenerator.hpp
src
block
EpetraExt_BlockCrsMatrix.cpp
EpetraExt_BlockCrsMatrix.h
EpetraExt_BlockDiagMatrix.cpp
EpetraExt_BlockDiagMatrix.h
EpetraExt_BlockMultiVector.cpp
EpetraExt_BlockMultiVector.h
EpetraExt_BlockUtility.cpp
EpetraExt_BlockUtility.h
EpetraExt_BlockVector.cpp
EpetraExt_BlockVector.h
EpetraExt_MultiComm.h
EpetraExt_MultiMpiComm.cpp
EpetraExt_MultiMpiComm.h
EpetraExt_MultiPointModelEvaluator.cpp
EpetraExt_MultiPointModelEvaluator.h
EpetraExt_MultiSerialComm.cpp
EpetraExt_MultiSerialComm.h
EpetraExt_PointToBlockDiagPermute.cpp
EpetraExt_PointToBlockDiagPermute.h
btf
EpetraExt_BlockJacobi_LinearProblem.cpp
EpetraExt_BlockJacobi_LinearProblem.h
EpetraExt_BTF_CrsGraph.cpp
EpetraExt_BTF_CrsGraph.h
EpetraExt_BTF_CrsMatrix.cpp
EpetraExt_BTF_CrsMatrix.h
EpetraExt_BTF_LinearProblem.cpp
EpetraExt_BTF_LinearProblem.h
coloring
EpetraExt_MapColoring.cpp
EpetraExt_MapColoring.h
EpetraExt_MapColoringIndex.cpp
EpetraExt_MapColoringIndex.h
EpetraExt_TCrsGraph_MapColoringIndex.h
distdir
EpetraExt_Directory.h
EpetraExt_Migrate.h
EpetraExt_PackTraits.h
hypre
EpetraExt_HypreIJMatrix.cpp
EpetraExt_HypreIJMatrix.h
inout
EpetraExt_BlockMapIn.cpp
EpetraExt_BlockMapIn.h
EpetraExt_BlockMapOut.cpp
EpetraExt_BlockMapOut.h
EpetraExt_CrsMatrixIn.cpp
EpetraExt_CrsMatrixIn.h
EpetraExt_DistArray.h
EpetraExt_Exception.h
EpetraExt_HDF5.cpp
EpetraExt_HDF5.h
EpetraExt_HDF5_DistObject.cpp
EpetraExt_HDF5_Handle.h
EpetraExt_mmio.cpp
EpetraExt_mmio.h
EpetraExt_MultiVectorIn.cpp
EpetraExt_MultiVectorIn.h
EpetraExt_MultiVectorOut.cpp
EpetraExt_MultiVectorOut.h
EpetraExt_OperatorOut.cpp
EpetraExt_OperatorOut.h
EpetraExt_readEpetraLinearSystem.cpp
EpetraExt_readEpetraLinearSystem.h
EpetraExt_RowMatrixOut.cpp
EpetraExt_RowMatrixOut.h
EpetraExt_Utils.cpp
EpetraExt_Utils.h
EpetraExt_VectorIn.cpp
EpetraExt_VectorIn.h
EpetraExt_VectorOut.cpp
EpetraExt_VectorOut.h
EpetraExt_XMLReader.cpp
EpetraExt_XMLReader.h
EpetraExt_XMLWriter.cpp
EpetraExt_XMLWriter.h
matlab
EpetraExt_MatlabEngine.cpp
EpetraExt_MatlabEngine.h
EpetraExt_PutBlockMap.cpp
EpetraExt_PutBlockMap.h
EpetraExt_PutMultiVector.cpp
EpetraExt_PutMultiVector.h
EpetraExt_PutRowMatrix.cpp
EpetraExt_PutRowMatrix.h
model_evaluator
EpetraExt_ModelEvaluator.cpp
EpetraExt_ModelEvaluator.h
EpetraExt_ModelEvaluatorScalingTools.cpp
EpetraExt_ModelEvaluatorScalingTools.h
EpetraExt_PolynomialVectorTraits.h
petsc
EpetraExt_PETScAIJMatrix.cpp
EpetraExt_PETScAIJMatrix.h
restrict
EpetraExt_RestrictedCrsMatrixWrapper.cpp
EpetraExt_RestrictedCrsMatrixWrapper.h
EpetraExt_RestrictedMultiVectorWrapper.cpp
EpetraExt_RestrictedMultiVectorWrapper.h
transform
EpetraExt_AMD_CrsGraph.cpp
EpetraExt_AMD_CrsGraph.h
EpetraExt_BlockAdjacencyGraph.cpp
EpetraExt_BlockAdjacencyGraph.h
EpetraExt_CrsSingletonFilter_LinearProblem.cpp
EpetraExt_CrsSingletonFilter_LinearProblem.h
EpetraExt_Dirichlet_CrsMatrix.cpp
EpetraExt_Dirichlet_CrsMatrix.h
EpetraExt_Dirichlet_Vector.cpp
EpetraExt_Dirichlet_Vector.h
EpetraExt_LPTrans_From_GraphTrans.cpp
EpetraExt_LPTrans_From_GraphTrans.h
EpetraExt_LPTrans_From_MatrixTrans.cpp
EpetraExt_LPTrans_From_MatrixTrans.h
EpetraExt_Overlap_CrsGraph.cpp
EpetraExt_Overlap_CrsGraph.h
EpetraExt_Permutation.cpp
EpetraExt_Permutation.h
EpetraExt_Permutation_impl.h
EpetraExt_Reindex_CrsMatrix.cpp
EpetraExt_Reindex_CrsMatrix.h
EpetraExt_Reindex_LinearProblem.cpp
EpetraExt_Reindex_LinearProblem.h
EpetraExt_Reindex_LinearProblem2.cpp
EpetraExt_Reindex_LinearProblem2.h
EpetraExt_Reindex_MultiVector.cpp
EpetraExt_Reindex_MultiVector.h
EpetraExt_Scale_LinearProblem.cpp
EpetraExt_Scale_LinearProblem.h
EpetraExt_SolverMap_CrsMatrix.cpp
EpetraExt_SolverMap_CrsMatrix.h
EpetraExt_SolverMap_LinearProblem.cpp
EpetraExt_SolverMap_LinearProblem.h
EpetraExt_StaticCondensation_LinearProblem.cpp
EpetraExt_StaticCondensation_LinearProblem.h
EpetraExt_SubCopy_CrsMatrix.cpp
EpetraExt_SubCopy_CrsMatrix.h
EpetraExt_SymmRCM_CrsGraph.cpp
EpetraExt_SymmRCM_CrsGraph.h
EpetraExt_Transform.h
EpetraExt_Transform_Composite.h
EpetraExt_Transpose_CrsGraph.cpp
EpetraExt_Transpose_CrsGraph.h
EpetraExt_Transpose_RowMatrix.cpp
EpetraExt_Transpose_RowMatrix.h
EpetraExt_View_CrsGraph.cpp
EpetraExt_View_CrsGraph.h
EpetraExt_View_CrsMatrix.cpp
EpetraExt_View_CrsMatrix.h
EpetraExt_View_MultiVector.cpp
EpetraExt_View_MultiVector.h
EpetraExt_ConfigDefs.h
EpetraExt_MatrixMatrix.cpp
EpetraExt_MatrixMatrix.h
EpetraExt_MatrixMatrix_mult_A_B.cpp
EpetraExt_MMHelpers.cpp
EpetraExt_MMHelpers.h
EpetraExt_ProductOperator.cpp
EpetraExt_ProductOperator.h
EpetraExt_TimedEpetraOperator.cpp
EpetraExt_TimedEpetraOperator.hpp
EpetraExt_Version.h
test
Block
cxx_main.cpp
Block_LL
cxx_main.cpp
BTF
cxx_main.cpp
Composite
cxx_main.cpp
Copy
cxx_main.cpp
hypre
cxx_main.cpp
EpetraExt_hypre_UnitTest.cpp
hypre_Helpers.cpp
hypre_Helpers.hpp
hypre_UnitTest.cpp
inout
cxx_main.cpp
EpetraExt_HDF5_UnitTest.cpp
Poisson2dOperator.cpp
Poisson2dOperator.h
inout_LL
cxx_main.cpp
Poisson2dOperator.cpp
Poisson2dOperator.h
MapColoring
cxx_main.cpp
MapColoring_LL
cxx_main.cpp
Matlab
cxx_main.cpp
MatrixMatrix
cxx_main.cpp
MatrixMatrix_LL
cxx_main.cpp
Overlap
cxx_main.cpp
Permutation
cxx_main.cpp
Permutation_LL
cxx_main.cpp
SingletonFilter
cxx_main.cpp
SymmRCM
cxx_main.cpp
Transpose
cxx_main.cpp
Transpose_LL
cxx_main.cpp
View
cxx_main.cpp
epetra_test_err.h