AA2Binary               Amino Acid To Binary
AAKpartComposition      Amino Acid to K Part Composition
AAindex                 Amino Acid Index
AAutoCor                Amino Acid Autocorrelation-Autocovariance
APAAC                   Amphiphilic Pseudo-Amino Acid
                        Composition(APAAC) (series)
APkNUCTri               Amphiphilic Pseudo-k Nucleotide
                        Composition-Tri(series)
APkNUCdi                Amphiphilic Pseudo-k Nucleotide
                        Composition-di(series)
AutoCorDiNuc            Di Nucleotide Autocorrelation-Autocovariance
AutoCorTriNuc           Tri Nucleotide Autocorrelation-Autocovariance
BLOSUM62                Blosum62
CTD                     Composition_Transition_Distribution
CTDC                    CTDC(CTD Composition)
CTDD                    CTDD(CTD Distribution)
CTDT                    CTDT(CTD Transition)
CkSAApair               Composition of k-Spaced Amino Acids pairs
CkSGAApair              Composition of k-Spaced Grouped Amino Acids
                        pairs
CkSNUCpair              Composition of k-Spaced Nucleotides Pairs
CodonFraction           Codon Fraction
CodonUsage              Codon Usage
DDE                     Dipeptide Deviation from Expected Mean value
DiNucIndex              Di Nucleotide Index (DiNucIndex)
Dinuc2Binary            Dinucleotide To Binary
EAAComposition          Enhanced Amino Acid Composition
EGAAComposition         Enhanced Grouped Amino Acid Composition
EIIP                    Electron-ion interaction pseudopotentials
                        (EIIP)
ENUComposition          Enhanced nucleotide Composition
EffectiveNumberCodon    Effective Number of Codon
ExpectedValKmerNUC      Expected Value for k-mers(Nuc)
ExpectedValueAA         Expected Value for each Amino Acid
ExpectedValueGAA        Expected Value for Grouped Amino Acid
ExpectedValueGKmerAA    Expected Value for Grouped k-mers
ExpectedValueKmerAA     Expected Value for k-mers
GAAKpartComposition     Grouped Amino Acid K Part Composition
GCcontent               G_C content
GrpDDE                  Group Dipeptide Deviation from Expected Mean
LocalPoSpKaaF           Local Position Specific k Amino Acids Frequency
LocalPoSpKnucF          Local Position Specific k Nucleotide Frequency
NUC2Binary              Nucleotide To Binary
NUCKpartComposition     Nucleotide to K Part Composition
PSEAAC                  Pseudo-Amino Acid Composition(PSEAAC)
                        (Parallel)
PSEkNCTri               Pseudo k Nucleotide Composition-Tri(Parallel)
PSEkNCdi                Pseudo k Nucleotide Composition-Di(Parallel)
PseEIIP                 Pseudo Electron-ion Interaction
                        Pseudopotentials of Trinucleotide(PseEIIP)
PseKRAAC_T1             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_1)
PseKRAAC_T10            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_10)
PseKRAAC_T11            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_11)
PseKRAAC_T12            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_12)
PseKRAAC_T13            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_13)
PseKRAAC_T14            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_14)
PseKRAAC_T15            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_15)
PseKRAAC_T16            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_16)
PseKRAAC_T2             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_2)
PseKRAAC_T3A            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_3B)
PseKRAAC_T3B            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_3B)
PseKRAAC_T4             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_4)
PseKRAAC_T5             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_5)
PseKRAAC_T6A            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_6A)
PseKRAAC_T6B            Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_6B)
PseKRAAC_T7             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_7)
PseKRAAC_T8             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_8)
PseKRAAC_T9             Pseudo K_tuple Reduced Amino Acid
                        Composition(PseKRAAComposition Type_9)
QSOrder                 Quasi Sequence Order
SAAC                    Splitted Amino Acid Composition(SAAC)
SGAAC                   Splitted Group Amino Acid Composition(SGAAC)
SOCNumber               Sequence Order Coupling Number
TriNucIndex             Tri Nucleotide Index (TriNucIndex)
alphabetCheck           AlphabetCheck
codonAdaptionIndex      Codon Adaption Index
conjointTriad           Conjoint Triad
conjointTriadKS         k-Spaced Conjoint Triad
fa.read                 Fasta File Reader
fickettScore            Ficket Score
kAAComposition          K Amino Acid Composition
kGAAComposition         K Grouped Amino Acid Composition
kNUComposition          K Nucleotide Composition
maxORF                  Maximum Open Reading Frame
maxORFlength            Maximum Open Reading Frame length
nameKmer                nameKmer
needleman               Needleman-Wunsch
nonStandardSeq          nonStandard amino acid sequence
novel_PseKNC            Novel Pseudo k Nucleotide Composition (series)
revComp                 reverseCompelement
zSCALE                  Z-SCALE
